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\n \n\n \n \n Burke, R. D., Osborne, L., Wang, D., Murabe, N., Yaguchi, S., & Nakajima, Y.\n\n\n \n \n \n \n \n Neuron-specific expression of a synaptotagmin gene in the sea urchin Strongylocentrotus purpuratus.\n \n \n \n \n\n\n \n\n\n\n The Journal of Comparative Neurology, 496(2): 244–251. May 2006.\n \n\n\n\n
\n\n\n\n \n \n \"Neuron-specificPaper\n  \n \n\n \n \n doi\n  \n \n\n \n link\n  \n \n\n bibtex\n \n\n \n\n \n\n \n \n \n \n \n \n \n\n  \n \n \n\n\n\n
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@article{burke_neuron-specific_2006,\n\ttitle = {Neuron-specific expression of a synaptotagmin gene in the sea urchin \\textit{{Strongylocentrotus} purpuratus}},\n\tvolume = {496},\n\tissn = {0021-9967, 1096-9861},\n\turl = {https://onlinelibrary.wiley.com/doi/10.1002/cne.20939},\n\tdoi = {10.1002/cne.20939},\n\tlanguage = {en},\n\tnumber = {2},\n\turldate = {2021-07-26},\n\tjournal = {The Journal of Comparative Neurology},\n\tauthor = {Burke, Robert D. and Osborne, Lisa and Wang, Diana and Murabe, Naoyuki and Yaguchi, Shunsuke and Nakajima, Yoko},\n\tmonth = may,\n\tyear = {2006},\n\tpages = {244--251},\n}\n\n
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\n \n\n \n \n Burke, R., Angerer, L., Elphick, M., Humphrey, G., Yaguchi, S., Kiyama, T., Liang, S., Mu, X., Agca, C., Klein, W., Brandhorst, B., Rowe, M., Wilson, K., Churcher, A., Taylor, J., Chen, N., Murray, G., Wang, D., Mellott, D., Olinski, R., Hallböök, F., & Thorndyke, M.\n\n\n \n \n \n \n \n A genomic view of the sea urchin nervous system.\n \n \n \n \n\n\n \n\n\n\n Developmental Biology, 300(1): 434–460. December 2006.\n \n\n\n\n
\n\n\n\n \n \n \"APaper\n  \n \n\n \n \n doi\n  \n \n\n \n link\n  \n \n\n bibtex\n \n\n \n\n \n  \n \n 7 downloads\n \n \n\n \n \n \n \n \n \n \n\n  \n \n \n\n\n\n
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@article{burke_genomic_2006,\n\ttitle = {A genomic view of the sea urchin nervous system},\n\tvolume = {300},\n\tissn = {00121606},\n\turl = {https://linkinghub.elsevier.com/retrieve/pii/S0012160606010773},\n\tdoi = {10.1016/j.ydbio.2006.08.007},\n\tlanguage = {en},\n\tnumber = {1},\n\turldate = {2021-07-26},\n\tjournal = {Developmental Biology},\n\tauthor = {Burke, R.D. and Angerer, L.M. and Elphick, M.R. and Humphrey, G.W. and Yaguchi, S. and Kiyama, T. and Liang, S. and Mu, X. and Agca, C. and Klein, W.H. and Brandhorst, B.P. and Rowe, M. and Wilson, K. and Churcher, A.M. and Taylor, J.S. and Chen, N. and Murray, G. and Wang, D. and Mellott, D. and Olinski, R. and Hallböök, F. and Thorndyke, M.C.},\n\tmonth = dec,\n\tyear = {2006},\n\tpages = {434--460},\n}\n\n
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\n \n\n \n \n Sea Urchin Genome Sequencing Consortium, Sodergren, E., Weinstock, G. M., Davidson, E. H, Cameron, R. A., Gibbs, R. A., Angerer, R. C., Angerer, L. M., Arnone, M. I., Burgess, D. R., Burke, R. D., Coffman, J. A., Dean, M., Elphick, M. R., Ettensohn, C. A., Foltz, K. R., Hamdoun, A., Hynes, R. O., Klein, W. H., Marzluff, W., McClay, D. R., Morris, R. L., Mushegian, A., Rast, J. P., Smith, L. C., Thorndyke, M. C., Vacquier, V. D., Wessel, G. M., Wray, G., Zhang, L., Elsik, C. G., Ermolaeva, O., Hlavina, W., Hofmann, G., Kitts, P., Landrum, M. J., Mackey, A. J., Maglott, D., Panopoulou, G., Poustka, A. J., Pruitt, K., Sapojnikov, V., Song, X., Souvorov, A., Solovyev, V., Wei, Z., Whittaker, C. A., Worley, K., Durbin, K. J., Shen, Y., Fedrigo, O., Garfield, D., Haygood, R., Primus, A., Satija, R., Severson, T., Gonzalez-Garay, M. L., Jackson, A. R., Milosavljevic, A., Tong, M., Killian, C. E., Livingston, B. T., Wilt, F. H., Adams, N., Belle, R., Carbonneau, S., Cheung, R., Cormier, P., Cosson, B., Croce, J., Fernandez-Guerra, A., Geneviere, A., Goel, M., Kelkar, H., Morales, J., Mulner-Lorillon, O., Robertson, A. J., Goldstone, J. V., Cole, B., Epel, D., Gold, B., Hahn, M. E., Howard-Ashby, M., Scally, M., Stegeman, J. J., Allgood, E. L., Cool, J., Judkins, K. M., McCafferty, S. S., Musante, A. M., Obar, R. A., Rawson, A. P., Rossetti, B. J., Gibbons, I. R., Hoffman, M. P., Leone, A., Istrail, S., Materna, S. C., Samanta, M. P., Stolc, V., Tongprasit, W., Tu, Q., Bergeron, K., Brandhorst, B. P., Whittle, J., Berney, K., Bottjer, D. J., Calestani, C., Peterson, K., Chow, E., Yuan, Q. A., Elhaik, E., Graur, D., Reese, J. T., Bosdet, I., Heesun, S., Marra, M. A., Schein, J., Anderson, M. K., Brockton, V., Buckley, K. M., Cohen, A. H., Fugmann, S. D., Hibino, T., Loza-Coll, M., Majeske, A. J., Messier, C., Nair, S. V., Pancer, Z., Terwilliger, D. P., Agca, C., Arboleda, E., Chen, N., Churcher, A. M., Hallbook, F., Humphrey, G. W., Idris, M. M., Kiyama, T., Liang, S., Mellott, D., Mu, X., Murray, G., Olinski, R. P., Raible, F., Rowe, M., Taylor, J. S., Tessmar-Raible, K., Wang, D., Wilson, K. H., Yaguchi, S., Gaasterland, T., Galindo, B. E., Gunaratne, H. J., Juliano, C., Kinukawa, M., Moy, G. W., Neill, A. T., Nomura, M., Raisch, M., Reade, A., Roux, M. M., Song, J. L., Su, Y., Townley, I. K., Voronina, E., Wong, J. L., Amore, G., Branno, M., Brown, E. R., Cavalieri, V., Duboc, V., Duloquin, L., Flytzanis, C., Gache, C., Lapraz, F., Lepage, T., Locascio, A., Martinez, P., Matassi, G., Matranga, V., Range, R., Rizzo, F., Rottinger, E., Beane, W., Bradham, C., Byrum, C., Glenn, T., Hussain, S., Manning, F. G., Miranda, E., Thomason, R., Walton, K., Wikramanayke, A., Wu, S., Xu, R., Brown, C. T., Chen, L., Gray, R. F., Lee, P. Y., Nam, J., Oliveri, P., Smith, J., Muzny, D., Bell, S., Chacko, J., Cree, A., Curry, S., Davis, C., Dinh, H., Dugan-Rocha, S., Fowler, J., Gill, R., Hamilton, C., Hernandez, J., Hines, S., Hume, J., Jackson, L., Jolivet, A., Kovar, C., Lee, S., Lewis, L., Miner, G., Morgan, M., Nazareth, L. V., Okwuonu, G., Parker, D., Pu, L., Thorn, R., & Wright, R.\n\n\n \n \n \n \n \n The Genome of the Sea Urchin Strongylocentrotus purpuratus.\n \n \n \n \n\n\n \n\n\n\n Science, 314(5801): 941–952. November 2006.\n \n\n\n\n
\n\n\n\n \n \n \"ThePaper\n  \n \n\n \n \n doi\n  \n \n\n \n link\n  \n \n\n bibtex\n \n\n \n\n \n\n \n \n \n \n \n \n \n\n  \n \n \n\n\n\n
\n 
@article{sea_urchin_genome_sequencing_consortium_genome_2006,\n\ttitle = {The {Genome} of the {Sea} {Urchin} \\textit{{Strongylocentrotus} purpuratus}},\n\tvolume = {314},\n\tissn = {0036-8075, 1095-9203},\n\turl = {https://www.sciencemag.org/lookup/doi/10.1126/science.1133609},\n\tdoi = {10.1126/science.1133609},\n\tlanguage = {en},\n\tnumber = {5801},\n\turldate = {2021-07-26},\n\tjournal = {Science},\n\tauthor = {{Sea Urchin Genome Sequencing Consortium} and Sodergren, E. and Weinstock, G. M. and Davidson, E. H and Cameron, R. A. and Gibbs, R. A. and Angerer, R. C. and Angerer, L. M. and Arnone, M. I. and Burgess, D. R. and Burke, R. D. and Coffman, J. A. and Dean, M. and Elphick, M. R. and Ettensohn, C. A. and Foltz, K. R. and Hamdoun, A. and Hynes, R. O. and Klein, W. H. and Marzluff, W. and McClay, D. R. and Morris, R. L. and Mushegian, A. and Rast, J. P. and Smith, L. C. and Thorndyke, M. C. and Vacquier, V. D. and Wessel, G. M. and Wray, G. and Zhang, L. and Elsik, C. G. and Ermolaeva, O. and Hlavina, W. and Hofmann, G. and Kitts, P. and Landrum, M. J. and Mackey, A. J. and Maglott, D. and Panopoulou, G. and Poustka, A. J. and Pruitt, K. and Sapojnikov, V. and Song, X. and Souvorov, A. and Solovyev, V. and Wei, Z. and Whittaker, C. A. and Worley, K. and Durbin, K. J. and Shen, Y. and Fedrigo, O. and Garfield, D. and Haygood, R. and Primus, A. and Satija, R. and Severson, T. and Gonzalez-Garay, M. L. and Jackson, A. R. and Milosavljevic, A. and Tong, M. and Killian, C. E. and Livingston, B. T. and Wilt, F. H. and Adams, N. and Belle, R. and Carbonneau, S. and Cheung, R. and Cormier, P. and Cosson, B. and Croce, J. and Fernandez-Guerra, A. and Geneviere, A.-M. and Goel, M. and Kelkar, H. and Morales, J. and Mulner-Lorillon, O. and Robertson, A. J. and Goldstone, J. V. and Cole, B. and Epel, D. and Gold, B. and Hahn, M. E. and Howard-Ashby, M. and Scally, M. and Stegeman, J. J. and Allgood, E. L. and Cool, J. and Judkins, K. M. and McCafferty, S. S. and Musante, A. M. and Obar, R. A. and Rawson, A. P. and Rossetti, B. J. and Gibbons, I. R. and Hoffman, M. P. and Leone, A. and Istrail, S. and Materna, S. C. and Samanta, M. P. and Stolc, V. and Tongprasit, W. and Tu, Q. and Bergeron, K.-F. and Brandhorst, B. P. and Whittle, J. and Berney, K. and Bottjer, D. J. and Calestani, C. and Peterson, K. and Chow, E. and Yuan, Q. A. and Elhaik, E. and Graur, D. and Reese, J. T. and Bosdet, I. and Heesun, S. and Marra, M. A. and Schein, J. and Anderson, M. K. and Brockton, V. and Buckley, K. M. and Cohen, A. H. and Fugmann, S. D. and Hibino, T. and Loza-Coll, M. and Majeske, A. J. and Messier, C. and Nair, S. V. and Pancer, Z. and Terwilliger, D. P. and Agca, C. and Arboleda, E. and Chen, N. and Churcher, A. M. and Hallbook, F. and Humphrey, G. W. and Idris, M. M. and Kiyama, T. and Liang, S. and Mellott, D. and Mu, X. and Murray, G. and Olinski, R. P. and Raible, F. and Rowe, M. and Taylor, J. S. and Tessmar-Raible, K. and Wang, D. and Wilson, K. H. and Yaguchi, S. and Gaasterland, T. and Galindo, B. E. and Gunaratne, H. J. and Juliano, C. and Kinukawa, M. and Moy, G. W. and Neill, A. T. and Nomura, M. and Raisch, M. and Reade, A. and Roux, M. M. and Song, J. L. and Su, Y.-H. and Townley, I. K. and Voronina, E. and Wong, J. L. and Amore, G. and Branno, M. and Brown, E. R. and Cavalieri, V. and Duboc, V. and Duloquin, L. and Flytzanis, C. and Gache, C. and Lapraz, F. and Lepage, T. and Locascio, A. and Martinez, P. and Matassi, G. and Matranga, V. and Range, R. and Rizzo, F. and Rottinger, E. and Beane, W. and Bradham, C. and Byrum, C. and Glenn, T. and Hussain, S. and Manning, F. G. and Miranda, E. and Thomason, R. and Walton, K. and Wikramanayke, A. and Wu, S.-Y. and Xu, R. and Brown, C. T. and Chen, L. and Gray, R. F. and Lee, P. Y. and Nam, J. and Oliveri, P. and Smith, J. and Muzny, D. and Bell, S. and Chacko, J. and Cree, A. and Curry, S. and Davis, C. and Dinh, H. and Dugan-Rocha, S. and Fowler, J. and Gill, R. and Hamilton, C. and Hernandez, J. and Hines, S. and Hume, J. and Jackson, L. and Jolivet, A. and Kovar, C. and Lee, S. and Lewis, L. and Miner, G. and Morgan, M. and Nazareth, L. V. and Okwuonu, G. and Parker, D. and Pu, L.-L. and Thorn, R. and Wright, R.},\n\tmonth = nov,\n\tyear = {2006},\n\tpages = {941--952},\n}\n\n
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\n \n\n \n \n Yaguchi, S., Nakajima, Y., Wang, D., & Burke, R. D.\n\n\n \n \n \n \n \n Embryonic expression of engrailed in sea urchins.\n \n \n \n \n\n\n \n\n\n\n Gene Expression Patterns, 6(5): 566–571. June 2006.\n \n\n\n\n
\n\n\n\n \n \n \"EmbryonicPaper\n  \n \n\n \n \n doi\n  \n \n\n \n link\n  \n \n\n bibtex\n \n\n \n\n \n  \n \n 7 downloads\n \n \n\n \n \n \n \n \n \n \n\n  \n \n \n\n\n\n
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@article{yaguchi_embryonic_2006,\n\ttitle = {Embryonic expression of engrailed in sea urchins},\n\tvolume = {6},\n\tissn = {1567133X},\n\turl = {https://linkinghub.elsevier.com/retrieve/pii/S1567133X05001262},\n\tdoi = {10.1016/j.modgep.2005.10.004},\n\tlanguage = {en},\n\tnumber = {5},\n\turldate = {2021-07-26},\n\tjournal = {Gene Expression Patterns},\n\tauthor = {Yaguchi, Shunsuke and Nakajima, Yoko and Wang, Diana and Burke, Robert D.},\n\tmonth = jun,\n\tyear = {2006},\n\tpages = {566--571},\n}\n\n
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\n \n\n \n \n Yaguchi, S., Yaguchi, J., & Burke, R. D.\n\n\n \n \n \n \n \n Specification of ectoderm restricts the size of the animal plate and patterns neurogenesis in sea urchin embryos.\n \n \n \n \n\n\n \n\n\n\n Development, 133(12): 2337–2346. June 2006.\n \n\n\n\n
\n\n\n\n \n \n \"SpecificationPaper\n  \n \n\n \n \n doi\n  \n \n\n \n link\n  \n \n\n bibtex\n \n\n \n  \n \n abstract \n \n\n \n  \n \n 6 downloads\n \n \n\n \n \n \n \n \n \n \n\n  \n \n \n\n\n\n
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@article{yaguchi_specification_2006,\n\ttitle = {Specification of ectoderm restricts the size of the animal plate and patterns neurogenesis in sea urchin embryos},\n\tvolume = {133},\n\tissn = {1477-9129, 0950-1991},\n\turl = {https://journals.biologists.com/dev/article/133/12/2337/43093/Specification-of-ectoderm-restricts-the-size-of},\n\tdoi = {10.1242/dev.02396},\n\tabstract = {The animal plate of the sea urchin embryo becomes the apical organ, a sensory structure of the larva. In the absence of vegetal signaling, an expanded and unpatterned apical organ forms. To investigate the signaling that restricts the size of the animal plate and patterns neurogenesis, we have expressed molecules that regulate specification of ectoderm in embryos and chimeras. Enhancing oral ectoderm suppresses serotonergic neuron differentiation, whereas enhancing aboral or ciliary band ectoderm increases differentiation of serotonergic neurons. In embryos in which vegetal signaling is blocked, Nodal expression does not reduce the size of the thickened animal plate; however, almost no neurons form. Expression of BMP in the absence of vegetal signaling also does not restrict the size of the animal plate, but abundant serotonergic neurons form. In chimeras in which vegetal signaling is blocked in the entire embryo, and one half of the embryo expresses Nodal,serotonergic neuron formation is suppressed in both halves. In similar chimeras in which vegetal signaling is blocked and one half of the embryo expresses Goosecoid (Gsc), serotonergic neurons form only in the half of the embryo not expressing Gsc. We propose that neurogenesis is specified by a maternal program that is restricted to the animal pole by signaling that is dependent on nuclearization of β-catenin and specifies ciliary band ectoderm. Subsequently, neurogenesis in the animal plate is patterned by suppression of serotonergic neuron formation by Nodal. Like other metazoans,echinoderms appear to have a phase of neural development during which the specification of ectoderm restricts and patterns neurogenesis.},\n\tlanguage = {en},\n\tnumber = {12},\n\turldate = {2021-07-26},\n\tjournal = {Development},\n\tauthor = {Yaguchi, Shunsuke and Yaguchi, Junko and Burke, Robert D.},\n\tmonth = jun,\n\tyear = {2006},\n\tpages = {2337--2346},\n}\n\n
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\n The animal plate of the sea urchin embryo becomes the apical organ, a sensory structure of the larva. In the absence of vegetal signaling, an expanded and unpatterned apical organ forms. To investigate the signaling that restricts the size of the animal plate and patterns neurogenesis, we have expressed molecules that regulate specification of ectoderm in embryos and chimeras. Enhancing oral ectoderm suppresses serotonergic neuron differentiation, whereas enhancing aboral or ciliary band ectoderm increases differentiation of serotonergic neurons. In embryos in which vegetal signaling is blocked, Nodal expression does not reduce the size of the thickened animal plate; however, almost no neurons form. Expression of BMP in the absence of vegetal signaling also does not restrict the size of the animal plate, but abundant serotonergic neurons form. In chimeras in which vegetal signaling is blocked in the entire embryo, and one half of the embryo expresses Nodal,serotonergic neuron formation is suppressed in both halves. In similar chimeras in which vegetal signaling is blocked and one half of the embryo expresses Goosecoid (Gsc), serotonergic neurons form only in the half of the embryo not expressing Gsc. We propose that neurogenesis is specified by a maternal program that is restricted to the animal pole by signaling that is dependent on nuclearization of β-catenin and specifies ciliary band ectoderm. Subsequently, neurogenesis in the animal plate is patterned by suppression of serotonergic neuron formation by Nodal. Like other metazoans,echinoderms appear to have a phase of neural development during which the specification of ectoderm restricts and patterns neurogenesis.\n
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